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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889302.1_cds_XP_016443992.1_39099
CDS Infomation

[gene=LOC107769302] [db_xref=GeneID:107769302] [protein=LOW QUALITY PROTEIN: tryptophan--tRNA ligase, cytoplasmic] [transl_except=(pos:745..747,aa:Other)] [protein_id=XP_016443992.1] [location=join(866..1206,1305..1490,2173..2224,2309..2374,2910..2996,4349..4356,10221..10386,12599..12670,12879..12947,13092..13202,13804..13854)] [gbkey=CDS]
Sequence

ATGGAGAAAAGGGAGGAGGCGAAAGAGGTGGTGGAAAACGAGGAGCAAGTAGTGAACCCA
TGGGAAGTATCAGCAAAAGACGGCGGCAAGATTGACTACGACAAACTAATCGATAAATTC
GGTTGCCAGAGGCTCGACGACTCCTTAATCCAGCGTGTTCAACGCCTCACGAATCGGCCG
GCTCACGTTTTCCTCCGCCGCGGAGTTTTCTTCGCTCATCGTGATTTCAACGATATATTG
GGTGCTTATGAAAAAGGGCAAAAGTTCTATTTATACACAGGCAGAGGACCTTCTTCTGAA
GCCTTGCATTTGGGTCACCTTATCCCCTTCATGTTCACAAAATATTTGCAGGATGCATTT
AAGGTGCCGCTAGTAATACAATTGACAGATGATGAGAAATGTATGTGGAAGAATTTGTCA
GTGGAAGAAAGCCAAAGACTTGCTCGTGAGAATGCTAAAGATATTATAGCTTGTGGATTT
GATGTTTCCAAGACTTTCATTTTCTCTGATTTCGATTATGTTGGTGGTGCCTTTTACAAG
AACATGGTGAAGGTTGCAAAATGTGTCACATACAATAAGGTGGTTGGCATTTTTGGTTTC
ACAGGTGAAGATCACATTGGGAAAGTTAGTTTTCCACCAGTTCAGGCTGTTCCATCCTTC
CCAAGTTCATTTCCTCATCTGTTTTCTGGCAATGATAACATTCGCTGCTTGATTCCATGT
GCCATAGACCAGTCACCCTACTTCTGATTTTTAATGTGTCTGCTTGTAAAAATTCTCCTG
CATTGCCTTTCTGTTAATATTCTACATTTTGTTGAACATTTGCAGGGGGAGAATGGAAAA
ATGTCTGCTAGTGATCCAAATTCTGCCATTTATGTGACCGATTCAGCAAAAGAGATAAAA
AACAAGATAAACAGATATGCATTCTCTGGTGGCAAAGACTCAATTGAGTTGCACAGAAAG
TACGGAGCGAACTTGGAGGTTGATATACCATTTAAGTATCTTGGCTTTTTCCTGGACGAT
GATGCTGAGCTGGAACGCATTAGAGAGGAATATGGGTCTGGACGTATGCTAACAGGTGAA
GTGAAAAAGAGGCTTACTGAAGTTCTAACAGATCTAGTTGAAAGCCATCGACGGGCTAGG
GCGTTGGTGACTGATGAGATGGTAGATGCTTTCATGGCCGTTAGACCTCTTCCTAATATG
TTCAACTGA

Peptide Sequence

PEP ID

XP_016443992.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: tryptophan--tRNA ligase, cytoplasmic [Nicotiana tabacum]
Sequence

MEKREEAKEVVENEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDDSLIQRVQRLTNRP
AHVFLRRGVFFAHRDFNDILGAYEKGQKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAF
KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVSKTFIFSDFDYVGGAFYK
NMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGNDNIRCLIPC
AIDQSPYFXFLMCLLVKILLHCLSVNILHFVEHLQGENGKMSASDPNSAIYVTDSAKEIK
NKINRYAFSGGKDSIELHRKYGANLEVDIPFKYLGFFLDDDAELERIREEYGSGRMLTGE
VKKRLTEVLTDLVESHRRARALVTDEMVDAFMAVRPLPNMFN

Transcript Sequence

Gene sequence data has not been registered.